Python scipy.sparse矩阵使用方法,,本文以csr_mat


本文以csr_matrix为例来说明sparse矩阵的使用方法,其他类型的sparse矩阵可以参考https://docs.scipy.org/doc/scipy/reference/sparse.html

csr_matrix是Compressed Sparse Row matrix的缩写组合,下面介绍其两种初始化方法

csr_matrix((data, (row_ind, col_ind)), [shape=(M, N)])

  wheredata,row_indandcol_indsatisfy the relationshipa[row_ind[k],col_ind[k]]=data[k].

csr_matrix((data, indices, indptr), [shape=(M, N)])

  is the standard CSR representation where the column indices for row i are stored inindices[indptr[i]:indptr[i+1]]and their corresponding values are stored indata[indptr[i]:indptr[i+1]]. If the shape parameter is not supplied, the matrix dimensions are inferred from the index arrays.

上述官方文档给出了:稀疏矩阵的参数及其含义、稀疏矩阵的构造方式。阐述形式简单明了,读起来令人赏心悦目。

Sparse matrices can be used in arithmetic operations: they support addition, subtraction, multiplication, division, and matrix power

Advantages of the CSR format

efficient arithmetic operations CSR + CSR, CSR * CSR, etc.efficient row slicingfast matrix vector products

Disadvantages of the CSR format

slow column slicing operations (consider CSC)changes to the sparsity structure are expensive (consider LIL or DOK)

上述官方文档时稀疏矩阵的一些特性以及csr_matrix的优缺点,并且在指明各种缺点的同时,提供了可以考虑的技术实现。

代码示例1

import numpy as npfrom scipy.sparse import csr_matrixrow = np.array([0, 0, 1, 2, 2, 2])col = np.array([0, 2, 2, 0, 1, 2])data = np.array([1, 2, 3, 4, 5, 6])a = csr_matrix((data, (row, col)), shape=(3, 3)).toarray()

print(a)

运行结果:

array([[1, 0, 2],       [0, 0, 3],       [4, 5, 6]])

代码示例2

indptr = np.array([0, 2, 3, 6])indices = np.array([0, 2, 2, 0, 1, 2])data = np.array([1, 2, 3, 4, 5, 6])a = csr_matrix((data, indices, indptr), shape=(3, 3)).toarray()print(a)

允许结果:

array([[1, 0, 2],       [0, 0, 3],       [4, 5, 6]])

上述两个代码示例也是摘自官方文档,表明了每种初始化方式的简单实现,给应用这种初始化方式的人很大启发。

总结:官方文档其实是很好的书写程序文档范例,欣赏她,模仿她,然后在实际中应用她...

Python scipy.sparse矩阵使用方法

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